Okay here is something interesting. This is a 'null test' for the two samples. That means what is here is only the difference between them.
I took both tracks, aligned them sample for sample with a distinctive point in each track, inverted the polarity of one and overlayed it with the other. If both tracks are exactly the same they will cancel out, if they are not the same then the difference between them will remain.
Interestingly there IS a difference! However it is very abrupt, either there is a difference or not. I guess this is evidence of error correction either recovering the data fully or not.
So, is the lathed CD reading more accurately? Rob and I did a few further tests. The conclusion was that the CD player did not read CDs exactly the same each time they are played, and the errors were sometimes in differnt places and lengths so this suggests it is not errors in the recording of the CD-R. But no, the lathed one didn't seem to be any more reliable!
To find out more about this I should do more tests, but to be honest I can't be bothered! I'm pretty certain ripping a CD with Exact Audio Copy on the computer would give repeatable reliable data, if you care about it!